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Companion Tools

GINsim

GINsim is a computer tool for the modeling and simulation of genetic regulatory networks, based on the discrete logical formalism.
You can obtain more information at http://GINsim.org.

LogicalModel

LogicalModel is a tool for the manipulation of multi-valued logical models. It provides a set of core interfaces for the interoperability between different logical modelling tools (such as GINsim and EpiLog).
You can get it at https://github.com/colomoto/logicalmodel.

MDDlib

MDDlib is a simple toolkit written in Java for the manipulation of Multi-valued Decision Diagrams (MDD). GINsim uses MDDlib at his core, since all logical functions are represented as MDDs.
You can get it at https://github.com/colomoto/mddlib.



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